Please, read this | Purpose | Workflow | Debug messages | Data load/storage | Calculating the distance/dissimilarity matrix | Applying PAM | Calculating silhouette | Comparison with other PAM implementations

Please, read this | Purpose | Workflow | Debug messages | Data storage | Special note for symmetric matrices: | Data load

Citation | Purpose | Workflow | Debug messages | Data load/storage | Read/write .csv files | Read/write Seurat (dgCMatrix) files | Read/write from other single cell experiment packages | Getting information on the stored matrix | Filtering genes or cells | Calculating the distance/dissimilarity matrix | Applying PAM | Alternative workflow: filtering by silhouette

Load package | Please, read this | Purpose | Workflow | Debug messages | Data storage | Special note for symmetric matrices: | Data load

Loading package | Purpose | Workflow | Debug messages | Data storage | Special note for symmetric matrices: | Data load

Load package | Purpose | Workflow | Debug messages | Data load/storage | Calculating the distance/dissimilarity matrix | Applying PAM | Calculating silhouette | Comparison with other PAM implementations